CDS

Accession Number TCMCG016C02222
gbkey CDS
Protein Id OMP03413.1
Location complement(join(11644..11790,12295..12416,12531..12675,13009..13204,13539..13582,13720..13820,13907..14363,14478..14794,14885..14948,15044..15148,15332..15606,15705..15750))
Organism Corchorus capsularis
locus_tag CCACVL1_02433

Protein

Length 672aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01006061.1
Definition hypothetical protein CCACVL1_02433 [Corchorus capsularis]
Locus_tag CCACVL1_02433

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription factor tfiiib component
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15198        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000126        [VIEW IN EMBL-EBI]
GO:0001025        [VIEW IN EMBL-EBI]
GO:0001156        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005667        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006352        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006384        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044798        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0070897        [VIEW IN EMBL-EBI]
GO:0070898        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090576        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATTCTGATATCTTTTCCGATGAGCCCCTTTTAACCCAAGCTCGTGCTGGTGCAAAGTTTCAACCCAAGACTAAACGTAAGGCAAAAGATAAGAATTCTGGTTCAATACCTTCAAAAGCCCCTGATGTTGGGAATGAAGAAGTGGCTAAATTACCCTCCAGTGGCTTAGATGCTGCTCATGTTATAGATGAGAGTAGGAGCTCAGAAGTAACGAACCCTTCCCAAGTAGCCACTGCAGATTCCCTGCTTGCAGATGTTACAGTTCCCGATGCTTGTGATGACTTGCATTCTAGTTTTGGAAGATCAGTTGGGGAGAGTGCAGACATATTTTCTGATTTGGAATGTATCGATCCATTTCTTACTCAGTCTTCTAATAACAATGGAGGTATTCAGATTGATGATGAAAGGATGGGAACACAGGAAGCAGGGGCCTTTCCTGATGTCAACACTGATGATATTTTGTCAGATATGACAATTTTGTCTGGACGGCGTGCTGGAAAATTCAAACCCAAACCCAGGTTGCAAACTAGTGTCAGCTCACATCCTGCTGTGGTTGACTCTGTTACGCATCCTCCAAATTCTCAGTTTGTTCCCCCTGAAACTACGTGTGGAGAGAGCTCTATTCCTGACTTTCCACCTGGTGATGTTCCTAATTGCTCACCCATCGATTTAGGTGCTTTTATTCCTCCAGATCCTTCTACCTCTGAGTTTCTGGCAAATGAGGAACTGCCAAACCTCGCAGAAGCTTCAAAAACAGGTGTTGCCCTTCCTGGAGATCCTCCTGGCGCGACTGAAAAGGTGAGTTCTAATATCACGCAAAAGAAGGCATTTCCAGTATCAAACCCTGCTCAAACATCCAAACAATCTTCCACTGGAGCTGAGGAGAATGAAAATGGAAAAACAAGAAAACGGCTGAGAAAGGAGATGACTAACCCTCAGGTTGTTCATGACCCTGAGGAGGGGGCTTGTAATGGTGATGACCCAGCTGTTGAATTTCCAAGCAATTCTGCTAGAGATGAGGATAAAGATGATGACGGCAATGCCAGTGATGAATATAATGTGGAGAGTGCATCTCCGAAGAGATCTTCTAGGAGATCGAAGAAACCTGTGGCTGAAAAAGAAAAACCTCCTCGAAAACATAAGAATGCTAATGAGAAAAAGGCTCAAAAGCAAAAGGAAACCAAGGAAGCATCAGATCAGCCAGCAAAAGAACGACCCAAGAGATTTTCTCGTTCAACTCGGAGAAAGAGAAAATTTGTGGATGAGACTTTACTGCAAACGCCAGAGGATGAAATTGACTTTGCAAAGGTAGCCTTGAAGGATATCATTCTGCTGGCAGATTATAAGGAGCGGTTAGCGAAAAAAGAGGCGAAAGAATTAAAATCATCATCGACCAATCAAAGTAACGACAACACAATGCAAGAGGAATATGCTCATAACGAAGAAAGCTCCCATGCTTCAGAACATGACCAAGGATATAAAGATGATCAAACGAGTATTAGGGCTCAATCAAGTTCCTTTTGCTTAAATTACCAGTCTTTCATGGATAAAGAACCCAGAGCAAGATGGTCAAAACAGGACACAGAATTGTTTTATGGGGCCATTAGACAGTTTGGGCCTGATTTTTCATTGATACAACAACTTTTTCCCGGAAGAAGTCGTCATCAGATTAAGTTAAAATTCAAGAATGAAGAGCGTCGATATCCATTGAGACTTTCTGAGGCTTTAGCAAGTCGTGCCAATGATCATTCCTATTTTGAGAAGGTGATTGAGCAGTTGCAGCAAGCTTCTGAGGCAGAGCAGCAGTCTAATGGAGATGTTTATGTTGATCTTGCACATGAAGAGGAAGTGACTCCTGAAACTACTGGGGAAGTAGCAAAGCCCGATCAGGATGAGGATGTAGCAGGCAGAGATCAAGAAGCAGATGTTACTGAAGACCATAGTCCTTTAAAAGCTGATGAAACTGATGATGATGATTATGATTTTTTGAGCTCATATAAAAGCGCATTTTAG
Protein:  
MDDSDIFSDEPLLTQARAGAKFQPKTKRKAKDKNSGSIPSKAPDVGNEEVAKLPSSGLDAAHVIDESRSSEVTNPSQVATADSLLADVTVPDACDDLHSSFGRSVGESADIFSDLECIDPFLTQSSNNNGGIQIDDERMGTQEAGAFPDVNTDDILSDMTILSGRRAGKFKPKPRLQTSVSSHPAVVDSVTHPPNSQFVPPETTCGESSIPDFPPGDVPNCSPIDLGAFIPPDPSTSEFLANEELPNLAEASKTGVALPGDPPGATEKVSSNITQKKAFPVSNPAQTSKQSSTGAEENENGKTRKRLRKEMTNPQVVHDPEEGACNGDDPAVEFPSNSARDEDKDDDGNASDEYNVESASPKRSSRRSKKPVAEKEKPPRKHKNANEKKAQKQKETKEASDQPAKERPKRFSRSTRRKRKFVDETLLQTPEDEIDFAKVALKDIILLADYKERLAKKEAKELKSSSTNQSNDNTMQEEYAHNEESSHASEHDQGYKDDQTSIRAQSSSFCLNYQSFMDKEPRARWSKQDTELFYGAIRQFGPDFSLIQQLFPGRSRHQIKLKFKNEERRYPLRLSEALASRANDHSYFEKVIEQLQQASEAEQQSNGDVYVDLAHEEEVTPETTGEVAKPDQDEDVAGRDQEADVTEDHSPLKADETDDDDYDFLSSYKSAF